| ClusterRadar: an Interactive Web-Tool for the Multi-Method Exploration of Spatial Clusters Over Time L Mason, B Hicks, JS Almeida arXiv preprint arXiv:2404.05897, 2024 | | 2024 |
| Abstract LB243: Deep learning-based molecular characterization of lung cancers from never smokers using hematoxylin and eosin-stained whole slide images M Saha, T Zhang, P Bhawsar, W Zhao, J Shi, SR Yang, J Almeida, ... Cancer Research 84 (7_Supplement), LB243-LB243, 2024 | | 2024 |
| Finding Regions of Interest in Whole Slide Images Using Multiple Instance Learning M Afonso, P Bhawsar, M Saha, JS Almeida, AL Oliveira arXiv preprint arXiv:2404.01446, 2024 | | 2024 |
| Associations between actigraphy-measured sleep duration, continuity, and timing with mortality in the UK Biobank PF Saint-Maurice, JR Freeman, D Russ, JS Almeida, MM Shams-White, ... Sleep 47 (3), zsad312, 2024 | 1 | 2024 |
| Actigraphy-derived measures of sleep and risk of prostate cancer in the UK Biobank JR Freeman, PF Saint-Maurice, EL Watts, SC Moore, MM Shams-White, ... JNCI: Journal of the National Cancer Institute 116 (3), 434-444, 2024 | 1 | 2024 |
| Image‐based multiplex immune profiling of cancer tissues: translational implications. A report of the International Immuno‐oncology Biomarker Working Group on Breast Cancer CA Jahangir, DB Page, G Broeckx, CA Gonzalez, C Burke, C Murphy, ... The Journal of pathology, 2024 | | 2024 |
| EpiVECS: exploring spatiotemporal epidemiological data using cluster embedding and interactive visualization L Mason, B Hicks, JS Almeida Scientific Reports 13 (1), 21193, 2023 | 1 | 2023 |
| Quest markup for developing FAIR questionnaire modules for epidemiologic studies DE Russ, NM Gerlanc, B Shen, B Patel, AB de González, ND Freedman, ... BMC Medical Informatics and Decision Making 23 (1), 238, 2023 | | 2023 |
| Wasm-iCARE: a portable and privacy-preserving web module to build, validate, and apply absolute risk models JB Balasubramanian, PP Choudhury, S Mukhopadhyay, T Ahearn, ... ArXiv, 2023 | | 2023 |
| mSigSDK--private, at scale, computation of mutation signatures A Ge, T Zhang, K Chen, MT Landi, B Park, J Balasubramanian, ... arXiv preprint arXiv:2308.02995, 2023 | | 2023 |
| Spatial analyses of immune cell infiltration in cancer: current methods and future directions: A report of the International Immuno‐Oncology Biomarker Working Group on Breast … DB Page, G Broeckx, CA Jahangir, S Verbandt, RR Gupta, J Thagaard, ... The Journal of pathology 260 (5), 514-532, 2023 | 7 | 2023 |
| Pitfalls in machine learning‐based assessment of tumor‐infiltrating lymphocytes in breast cancer: A report of the International Immuno‐Oncology Biomarker Working Group on … J Thagaard, G Broeckx, DB Page, CA Jahangir, S Verbandt, Z Kos, ... The Journal of pathology 260 (5), 498-513, 2023 | 11 | 2023 |
| A FAIR platform for reproducing mutational signature detection on tumor sequencing data A Ge, T Zhang, C Bodelon, M Garcia-Closas, J Almeida, ... arXiv preprint arXiv:2306.01634, 2023 | | 2023 |
| Moving toward findable, accessible, interoperable, reusable practices in epidemiologic research M García-Closas, TU Ahearn, MM Gaudet, AN Hurson, ... American journal of epidemiology 192 (6), 995-1005, 2023 | 9 | 2023 |
| Halcyon--A Pathology Imaging and Feature analysis and Management System E Bremer, T DiPrima, J Balsamo, J Almeida, R Gupta, J Saltz arXiv preprint arXiv:2304.10612, 2023 | | 2023 |
| Comparison of deep learning approaches applied to hematoxylin and eosin-stained whole slide images from women with benign breast disease to predict risk of developing invasive … M Saha, M Abubakar, TE Rohan, RM Pfeiffer, MA Duggan, K Richert-Boe, ... Cancer Research 83 (7_Supplement), 5393-5393, 2023 | | 2023 |
| Interpretable, non-mechanistic forecasting using empirical dynamic modeling and interactive visualization L Mason, A Berrington de Gonzalez, M Garcia-Closas, SJ Chanock, ... Plos one 18 (4), e0277149, 2023 | | 2023 |
| MedicaidJS: a FAIR approach to real-time drug analytics K Agarwal, HR Kim, JS Almeida, L Sandoval Bioinformatics Advances 3 (1), vbad170, 2023 | | 2023 |
| PRScalc, a privacy-preserving calculation of raw polygenic risk scores from direct-to-consumer genomics data L Sandoval, S Jafri, JB Balasubramanian, P Bhawsar, JL Edelson, ... Bioinformatics Advances 3 (1), vbad145, 2023 | | 2023 |
| SNOOP Method: Faithfulness of Text Summarizations for Single Nucleotide Polymorphisms W Maass, CK Agnes, MR Rahman, JS Almeida | | 2023 |
Susana VingaINESC-ID, Instituto Superior Técnico, Universidade de LisboaVerified email at tecnico.ulisboa.pt
