Articles with public access mandates - Jonas S AlmeidaLearn more
Not available anywhere: 1
Prediction of pelvic organ prolapse using an artificial neural network
CJ Robinson, S Swift, DD Johnson, JS Almeida
American Journal of Obstetrics and Gynecology 199 (2), 193. e1-193. e6, 2008
Mandates: US National Institutes of Health
Available somewhere: 60
Alignment-free sequence comparison: benefits, applications, and tools
A Zielezinski, S Vinga, J Almeida, WM Karlowski
Genome biology 18, 1-17, 2017
Mandates: Fundação para a Ciência e a Tecnologia, Portugal
Benchmarking of alignment-free sequence comparison methods
A Zielezinski, HZ Girgis, G Bernard, CA Leimeister, K Tang, T Dencker, ...
Genome biology 20, 1-18, 2019
Mandates: US National Science Foundation, US Department of Energy, US National …
36th international symposium on intensive care and emergency medicine: Brussels, Belgium. 15-18 March 2016
RM Bateman, MD Sharpe, JE Jagger, CG Ellis, J Solé-Violán, ...
Critical care 20, 13-182, 2016
Mandates: British Heart Foundation
Computational pathology: a path ahead
DN Louis, M Feldman, AB Carter, AS Dighe, JD Pfeifer, L Bry, JS Almeida, ...
Archives of pathology & laboratory medicine 140 (1), 41-50, 2016
Mandates: US National Institutes of Health
Racial and ethnic disparities in excess deaths during the COVID-19 pandemic, March to December 2020
MS Shiels, AT Haque, EA Haozous, PS Albert, JS Almeida, ...
Annals of internal medicine 174 (12), 1693-1699, 2021
Mandates: US National Institutes of Health
Parameter optimization in S-system models
M Vilela, IC Chou, S Vinga, ATR Vasconcelos, EO Voit, JS Almeida
BMC systems biology 2, 1-13, 2008
Mandates: US National Institutes of Health
Identification of prognostic gene signatures of glioblastoma: a study based on TCGA data analysis
YW Kim, D Koul, SH Kim, AK Lucio-Eterovic, PR Freire, J Yao, J Wang, ...
Neuro-oncology 15 (7), 829-839, 2013
Mandates: US National Institutes of Health
Genomic and evolutionary classification of lung cancer in never smokers
T Zhang, P Joubert, N Ansari-Pour, W Zhao, PH Hoang, R Lokanga, ...
Nature genetics 53 (9), 1348-1359, 2021
Mandates: US National Institutes of Health, National Institute for Health Research, UK …
Utilizing automated breast cancer detection to identify spatial distributions of tumor-infiltrating lymphocytes in invasive breast cancer
H Le, R Gupta, L Hou, S Abousamra, D Fassler, L Torre-Healy, RA Moffitt, ...
The American journal of pathology 190 (7), 1491-1504, 2020
Mandates: US National Science Foundation, US National Institutes of Health
The emergence of pathomics
R Gupta, T Kurc, A Sharma, JS Almeida, J Saltz
Current Pathobiology Reports 7, 73-84, 2019
Mandates: US National Institutes of Health
An introspective comparison of random forest-based classifiers for the analysis of cluster-correlated data by way of RF++
YV Karpievitch, EG Hill, AP Leclerc, AR Dabney, JS Almeida
PloS one 4 (9), e7087, 2009
Mandates: US National Institutes of Health
Premature atherosclerosis is associated with hypovitaminosis D and angiotensin-converting enzyme inhibitor non-use in lupus patients
RL Ravenell, DL Kamen, TJ Fleury, JD Spence, BW Hollis, MG Janech, ...
The American journal of the medical sciences 344 (4), 268-273, 2012
Mandates: US National Institutes of Health
Towards generation, management, and exploration of combined radiomics and pathomics datasets for cancer research
J Saltz, J Almeida, Y Gao, A Sharma, E Bremer, T DiPrima, M Saltz, ...
AMIA Summits on Translational Science Proceedings 2017, 85, 2017
Mandates: US National Institutes of Health
A containerized software system for generation, management, and exploration of features from whole slide tissue images
J Saltz, A Sharma, G Iyer, E Bremer, F Wang, A Jasniewski, T DiPrima, ...
Cancer research 77 (21), e79-e82, 2017
Mandates: US National Institutes of Health
Exploratory analysis of the copy number alterations in glioblastoma multiforme
P Freire, M Vilela, H Deus, YW Kim, D Koul, H Colman, KD Aldape, ...
PloS one 3 (12), e4076, 2008
Mandates: US National Institutes of Health
Open access image repositories: high-quality data to enable machine learning research
F Prior, J Almeida, P Kathiravelu, T Kurc, K Smith, TJ Fitzgerald, J Saltz
Clinical radiology 75 (1), 7-12, 2020
Mandates: US National Institutes of Health
Linked cancer genome atlas database
M Saleem, SS Padmanabhuni, ACN Ngomo, JS Almeida, S Decker, ...
Proceedings of the 9th International Conference on Semantic Systems, 129-134, 2013
Mandates: Science Foundation Ireland
Impact of population growth and aging on estimates of excess US deaths during the COVID-19 pandemic, March to August 2020
MS Shiels, JS Almeida, M García-Closas, PS Albert, ND Freedman, ...
Annals of Internal Medicine 174 (4), 437-443, 2021
Mandates: US National Institutes of Health
A self-updating road map of The Cancer Genome Atlas
DE Robbins, A Grüneberg, HF Deus, MM Tanik, JS Almeida
Bioinformatics 29 (10), 1333-1340, 2013
Mandates: US National Institutes of Health, Science Foundation Ireland
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